Pairwise Alignments

Query, 237 a.a., type IV pilus biogenesis/stability protein PilW from Vibrio cholerae E7946 ATCC 55056

Subject, 792 a.a., TPR/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 2/149 (1%)

Query: 40  ALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEH 99
           +LG+     G   +AR   E+ALQ  P    +  ++    +++GE   ARK YR  L   
Sbjct: 597 SLGVCMAGLGRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYA 656

Query: 100 PKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAR 159
           P +   L   G     +  Y  A QYF +A            + N    +++ G+ D AR
Sbjct: 657 PGHVFALVRLGQLAEGEKRYAQARQYFNKAARAGDSG--GLVHRNLARLSMRQGRPDEAR 714

Query: 160 EYFKRAIDHDPNRLLSILQLTKMEIEAGD 188
           E+   A+  +P   +++  + ++ ++ G+
Sbjct: 715 EHLHDALLRNPQDAVALQLMARLYLDGGE 743



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 81  AVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISA 140
           ++G+   A + Y+TAL     N    N+ G  +   G +  A +YF +A+++        
Sbjct: 570 SLGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKPG--DPM 627

Query: 141 SYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTKMEIEAGDYTPAR 193
           +  N G      G+T  AR+ +++ + + P  + ++++L ++      Y  AR
Sbjct: 628 ALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRYAQAR 680



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 2/135 (1%)

Query: 82  VGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISAS 141
           +G +  AR+ +  AL   P +   L N GT     GE   A + +R+ ++    ++ +  
Sbjct: 605 LGRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALV 664

Query: 142 YENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLTKMEIEAGDYTPARLRLMDLNQ 201
               G  A    +   AR+YF +A     +  L    L ++ +  G    AR  L D   
Sbjct: 665 --RLGQLAEGEKRYAQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEAREHLHDALL 722

Query: 202 RYGYQKASLKLLIEL 216
           R      +L+L+  L
Sbjct: 723 RNPQDAVALQLMARL 737