Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., ABC transporter permease from Rhodanobacter denitrificans FW104-10B01

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 72/329 (21%), Positives = 138/329 (41%), Gaps = 23/329 (6%)

Query: 7   FKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQASFQLERM 66
           F  E+ ++  +P   + VF   +    ++      ++ R   ++V N D  + S +L + 
Sbjct: 15  FVKEILSILRDPRSRMVVFVPPILQLLVFAFAATLEV-RNVDIAVYNQDAGRWSHELVQR 73

Query: 67  VDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASYFL 126
           +D+   +  V+   +     +     +V   L IP  F + +  G S      G A    
Sbjct: 74  MDSARFITHVRHVDSQRQLHELIDRGQVIAALAIPADFSRTIAAGGS------GRAQ--- 124

Query: 127 VYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVDYV 186
               +V+G     G +      +     G  +    Q  +P    ++  FNP + Y  ++
Sbjct: 125 ---VLVDGRRSNSGQITVAYLSTIAAEVGAAVVPGTQASNPVV--VRHWFNPNLVYRWFI 179

Query: 187 VP------AVFVLILQQTLIMAAGLMVGTQKQGHGYWSRVAPAKLLLVRSFVLVAVYYLL 240
           VP      A+F  +L  +L +A    +GT  Q     S  +  ++++ +S   +A+  LL
Sbjct: 180 VPGLTGILALFSALLITSLSIARERELGTFDQL--LVSPTSTPEIIISKSLPALAIGTLL 237

Query: 241 SLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVVLISSM 300
            L+   A   L G+        L++ L+ F+L+   +G+ + AV+  ++   L      +
Sbjct: 238 GLFMISAGVFLFGIPFTGSFGLLLASLVLFILSVVGIGLMISAVSATQQQAILGAFAIGV 297

Query: 301 PLIFTAGFIWPLEMIPAPLVWLAQCFPST 329
           P +  +GF  P+E +P  L WLAQ  P T
Sbjct: 298 PAVLMSGFATPVENMPVALQWLAQAIPLT 326