Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., ABC-type multidrug transport system, permease component from Acidovorax sp. GW101-3H11

 Score =  182 bits (461), Expect = 2e-50
 Identities = 112/348 (32%), Positives = 176/348 (50%), Gaps = 3/348 (0%)

Query: 3   LFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQASFQ 62
           L   + A L  +  +  V+L + G  V Y F YP  YA ++     V+VV++D++  S Q
Sbjct: 14  LLHAWLAALATVVRDKGVLLLLIGAPVLYGFFYPWFYADEVLTRVPVAVVDMDRTSLSRQ 73

Query: 63  LERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDA 122
           + R  DA P++++     +  +A+QA    ++ G  VIP H  ++++ G++  ++   + 
Sbjct: 74  ITRFADADPRIEVRLVTGSEHEAQQALWRGEIEGYAVIPPHLKRNVVRGENAVVSIEANG 133

Query: 123 SYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGY 182
           +Y L+   +  G A+A GT++A  ++ +L   G+    A    +P        FNP  GY
Sbjct: 134 AYALLNKAVQFGFAEAVGTVSAGVEIRKLQASGQSALQARASRAPVQLQTVALFNPIEGY 193

Query: 183 VDYVVPAVFVLILQQTLIMAAGLMVGTQKQGHGYWSRVAPAKLLLVRSFVLVAVYYLLSL 242
             +VVPAV +LILQQTL+M A L+ GT  +        A A   L R   L  + +   L
Sbjct: 194 GSFVVPAVALLILQQTLLMGAALLAGTWVEA---GQHRASATTWLGRLLALSTLGWASGL 250

Query: 243 YYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVVLISSMPL 302
           +YFG  F LH       P   ++LL  ++ A   +G  LG     RE    V+L +++P+
Sbjct: 251 FYFGWIFVLHDYPRGGNPLGALALLACYVPAIAALGSLLGLWFGNRERALQVLLFTTLPI 310

Query: 303 IFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAP 350
            F AGF WP+E +P PL WL    PST  +Q  L LNQ+ A      P
Sbjct: 311 AFVAGFSWPVEALPEPLQWLRWLLPSTSGVQASLRLNQLGAPLQAALP 358