Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 74/334 (22%), Positives = 135/334 (40%), Gaps = 3/334 (0%)

Query: 6   LFKAELKALFTNP-VVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQASFQLE 64
           L + EL AL+ NP  + L  +  ++    L+ L ++  +PR+  V++V+LD S  S +L 
Sbjct: 4   LLRRELGALWQNPWQLALVSYLPILAMLALWWL-FSAALPRQLPVAMVDLDNSSLSRELG 62

Query: 65  RMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASY 124
           R + A+P +  +    ++  A+ A    +V  ++V+P  F +DL  G  PT+    +  +
Sbjct: 63  RHIAASPVISPISFA-SLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQF 121

Query: 125 FLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVD 184
            LV   +   L QA          S+ +  G     A  + +P +      FN    YV 
Sbjct: 122 LLVGKLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYVG 181

Query: 185 YVVPAVFVLILQQTLIMAAGLMVGTQKQGHGYWSRVAPAKLLLVRSFVLVAVYYLLSLYY 244
           ++VP V + + Q T ++     +  + +       V     L  +    + +  L  L+ 
Sbjct: 182 FLVPPVLIALWQLTAMLVFANALNRELEPSARCDSVGLLPRLGAKLLCYMPLLMLQGLFI 241

Query: 245 FGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVVLISSMPLIF 304
               F    +   A P  LI  +L  LLA   +   +  +      V         P   
Sbjct: 242 HALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESARVVSFCTALFAPAFA 301

Query: 305 TAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGL 338
             G  +P++ +PA   +     PS+  I   + L
Sbjct: 302 FMGVTFPVQDMPAAAQYWRLLMPSSHYIDSHIAL 335