Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 64/318 (20%), Positives = 124/318 (38%), Gaps = 30/318 (9%)

Query: 18  PVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQASFQLERMVDATPQVKIVQ 77
           PV+ L +FG  +              PR    +V+  + S     + + ++ T   K  +
Sbjct: 51  PVMQLLLFGYAI-----------NTTPRHLPTAVLLQEDSDLGRSILKALENTAYFKFTR 99

Query: 78  RDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAGDASYFLVYGTIVEGLAQ 137
             H++A+     L  +V   + IP  F + +  G+ P +  A DA+  +  G+ +  L Q
Sbjct: 100 EVHSVAEFDDLLLSGRVLFGVEIPRGFERAVRRGEKPAILVAADATDPVAAGSALSALGQ 159

Query: 138 AGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRMGYVDYVVPAVFVLILQQ 197
                  QT +    + G+P         P        +NP       +VP +   IL  
Sbjct: 160 -----IVQTALMHDRVGGDPAN------PPFEIRAHARYNPAASSRLNIVPGLVGTILTM 208

Query: 198 TLIMAAGLMVGTQKQGHGYWSR-----VAPAKLLLVRSFVLVAVYYLLSLYYFGASFDLH 252
           T+++   L V T++   G         + P +++L +    V V ++ +    G    L 
Sbjct: 209 TMLIFTALSV-TREIERGTMENLLSMPITPVEVMLGKILPYVGVGFIQASLILGIGVLLF 267

Query: 253 GVNTLAKPNDLISLLLPFLLACNF-VGIALGAVTPRRELVTLVVLISSMPLIFTAGFIWP 311
           GV  L     +++LL    +  N  +G     +   +       ++  +P I  +GF++P
Sbjct: 268 GV-PLRGSLAMLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFLPSILLSGFMFP 326

Query: 312 LEMIPAPLVWLAQCFPST 329
              +P    ++ +C P T
Sbjct: 327 FAGMPIWAQYIGECLPLT 344