Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., ABC-type multidrug transport system, permease component from Marinobacter adhaerens HP15

 Score = 63.5 bits (153), Expect = 9e-15
 Identities = 83/379 (21%), Positives = 154/379 (40%), Gaps = 28/379 (7%)

Query: 11  LKALFTNPVVVLT----VFGGVVFYSFLYPLPYAKQIP---REQTVSVVNLDQSQASFQL 63
           ++A+F   ++ L      FG +V    L  L +   I    R   V +V+  QS  S ++
Sbjct: 7   IRAIFGKELIQLRRDRMTFGMIVMIPLLQLLLFGYAINTNIRHIPVGIVDFSQSGLSREI 66

Query: 64  ERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAG-DA 122
            ++V AT  V+I     ++  A+ A    +V  +L+IPE    D  L +  +L +    A
Sbjct: 67  VQIVKATQVVEIRSYFESVEKAQAAIASAEVRAVLIIPEDV--DNRLARHQSLGFGSPPA 124

Query: 123 SYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTF------ 176
           +       I + +A    T+ A    S   + G P+   A+        + PTF      
Sbjct: 125 TDEETSQPIAQWIADGSDTIIASAIKS---LRGMPL---AELLDRPVNRVTPTFEVTLLY 178

Query: 177 NPRMGYVDYVVPAVFVLILQQTLIM-AAGLMVGTQKQGHGYW---SRVAPAKLLLVRSFV 232
           NP    V  +VP +  +IL  T+IM  +  +V  +++G+      + V P +L++ +   
Sbjct: 179 NPEQRTVVNIVPGLVAIILTMTMIMFTSAAIVRERERGNMEMLISTPVRPIELMIGKIIP 238

Query: 233 LVAVYYLLSLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVT 292
            + +  +      G    L  V        L  +   F+ A   +G+ +  +   +    
Sbjct: 239 YIFIGVIQVSIILGLGRVLFHVPVEGGLAQLAGVTFLFITASLTLGLVISTIARNQLQSM 298

Query: 293 LVVLISSMPLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKW 352
            + +   MP I  +GF++P E +P    ++A+  P+T  +    G+       + +A   
Sbjct: 299 QMTVFVLMPSILLSGFVFPYEGMPVAAQYIAEALPATHFMHLVRGVVLRDVEVTNMAS-- 356

Query: 353 TLLWAQALVWGGLAFYLLR 371
            + W      GGL    LR
Sbjct: 357 DVYWLALFTLGGLLVASLR 375