Pairwise Alignments

Query, 382 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  310 bits (793), Expect = 6e-89
 Identities = 155/372 (41%), Positives = 233/372 (62%)

Query: 1   MTLFELFKAELKALFTNPVVVLTVFGGVVFYSFLYPLPYAKQIPREQTVSVVNLDQSQAS 60
           M L++L   ELKA+ ++  + +T+FGGV+FYS LYPLPY  Q+P EQ + VV+LD S  S
Sbjct: 1   MNLWQLVLTELKAIVSDKAIAVTLFGGVLFYSVLYPLPYLHQVPTEQQLIVVDLDHSSLS 60

Query: 61  FQLERMVDATPQVKIVQRDHTIADAKQAFLDKKVAGILVIPEHFYKDLLLGKSPTLAYAG 120
            QL R  DA+ +++++ +  +I +AK+     K  G+LVIPE F +DLLLGK  TL+Y G
Sbjct: 61  RQLIRHADASAKIQVIGQVGSITEAKRFIETGKAHGLLVIPEGFRRDLLLGKGVTLSYGG 120

Query: 121 DASYFLVYGTIVEGLAQAGGTLAAQTKVSRLVIEGEPMAFAAQHFSPTSANLKPTFNPRM 180
           DASYFL+Y  + EGL  AG     Q ++  ++ +G+    A Q+ +    N  P FNP +
Sbjct: 121 DASYFLIYSAVAEGLVSAGMDAGKQVQLIGMLAQGKNPKEAEQNLNSLHLNSVPAFNPSL 180

Query: 181 GYVDYVVPAVFVLILQQTLIMAAGLMVGTQKQGHGYWSRVAPAKLLLVRSFVLVAVYYLL 240
           GY  YVVP +F+LIL QTL++  G++   Q +   YW +V+P +L+  R    + +Y + 
Sbjct: 181 GYTPYVVPGLFLLILHQTLLIGTGILGAGQWRSRSYWQQVSPLQLVCGRILAFMLIYMVF 240

Query: 241 SLYYFGASFDLHGVNTLAKPNDLISLLLPFLLACNFVGIALGAVTPRRELVTLVVLISSM 300
           + +Y G  +  + V+  A    +   LLPFLLA    G+A+  +  RR+L T V+L+ SM
Sbjct: 241 TSFYVGYCYHWYKVSIQASLGLVALWLLPFLLATAAAGVAMSTLFSRRDLPTQVLLLISM 300

Query: 301 PLIFTAGFIWPLEMIPAPLVWLAQCFPSTPAIQGFLGLNQMAASWSTIAPKWTLLWAQAL 360
           P++F +GF+WP+ +IP PLV  +Q  P+ PAI G L LNQM ASW+++ PKW  LW   +
Sbjct: 301 PILFVSGFVWPIALIPEPLVLGSQIIPAVPAIMGMLELNQMGASWASVLPKWLQLWGLFV 360

Query: 361 VWGGLAFYLLRR 372
           ++ GLA   ++R
Sbjct: 361 LFLGLAILGIKR 372