Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 907 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 70/363 (19%), Positives = 137/363 (37%), Gaps = 30/363 (8%)

Query: 32  ILLAVSIWWIFSQGIARD---LPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEA 88
           +L A+ +  IF  GI+ D   L F V D   +  SR  +     +             E 
Sbjct: 561 LLGAIFMMVIFGYGISLDVEKLAFAVYDQDQTPQSRAYLEAFRGSRYFSEQPSIRDAAEL 620

Query: 89  SQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQ 148
            + ++ ++I   + IP  F + +Y   QP V  + +  M    +   + V          
Sbjct: 621 HRRLQRSEIKLALEIPPGFGRDLYAGRQPTVAAWLDGGMPFRAETSRNYVEAVH------ 674

Query: 149 VDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTI 208
              + N+      +  A+ R    + +    +NQ+       V+AI P +  + +     
Sbjct: 675 ---LANIEQLAEQSSPALNRQSAAKLETRFRYNQDV----VSVNAIGPGVMALILAFIPA 727

Query: 209 LILAANY---RHYGLKSWLAQSPLTQLTRTLLPYLPIFMLQGLGFLI------WFYDVLR 259
           ++ A      +  G  +    +PLT+L   L    P  ++  +   +      W + V  
Sbjct: 728 MLTALGIVREKELGSITNFYATPLTRLEFLLGKQAPYLLVSLINLAVLTAMNRWLFGV-- 785

Query: 260 WPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTA-PSFAFMGITFPA 318
            P  G   TL     + V+A   MG      T     A+      T+ P+  F G+  P 
Sbjct: 786 -PFKGSALTLAFGGLLYVLATTSMGLLISAFTRTQIAAILGTMIITSLPTIQFSGLIVPR 844

Query: 319 SDMNTLAQAWRNLLPISHYIEVQVNQVSYGLEALSSLQPMVNMWGYLLPL-GLALLLIRK 377
           S ++  A     L P  +++++ V   +  L+        + ++G+ +   GL+L++++K
Sbjct: 845 SSLDGAAAVMGMLFPAGYFLDITVGTFTKALDIRQLWPQCLALFGFFIGFTGLSLVMLKK 904

Query: 378 HLA 380
             A
Sbjct: 905 QEA 907