Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 913 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 77/351 (21%), Positives = 134/351 (38%), Gaps = 25/351 (7%)

Query: 32  ILLAVSIWWIFSQGIARD---LPFGVVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEA 88
           +L +V + +I   G++ D   L + V+D   +  S+  +  +  +   +     A+  E 
Sbjct: 568 MLGSVLLMFIMGYGVSFDVENLTYAVLDRDQTTTSQHYLLNMSGSRYFIEKAPLANHAEL 627

Query: 89  SQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQ 148
            Q MRSN I   + IP  F + + R   PQV  + +  M +    +   V     T+   
Sbjct: 628 DQRMRSNDISLAVEIPPNFGRDLKRGAVPQVAFWIDGAMPMRADTIKGYVQGIHLTY--- 684

Query: 149 VDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTI 208
              ++ LA +        G+  P    I   +N +      +  A++P L  +   + T 
Sbjct: 685 ---LQQLAREA----GVNGQLAPADVAIRYRYNPDVQSLPAMAPAMIPLLLMMIPAMLTA 737

Query: 209 LILAANYRHYGLKSWLAQSPLTQLTRTL---LPYLPIFMLQGLGFLIWFYDVLRWPMFGH 265
           L +    +  G  +    +P T+L   L   LPY+ + M       +    V   P+ G 
Sbjct: 738 LGVVRE-KELGSITNFYVTPTTRLEFLLGKQLPYIALGMFNFATLALLAVFVFGIPIKGS 796

Query: 266 FSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFT-APSFAFMGITFPASDMNTL 324
             TL L   + V     +G     +      A+      T  P+  F G+  P S M   
Sbjct: 797 ILTLCLGALLYVTCATGLGLLMSSILNSQIAAIFGTTIVTLLPAIQFSGLIHPVSAMEGA 856

Query: 325 AQAWRNLLPISHYIEVQVNQVSYGLEALSSLQPMVNMWGYLLPLGLALLLI 375
                 L P SH++ +     S  L  L+ L P      Y +P+ LA+ L+
Sbjct: 857 GAFIGKLYPTSHFLIISRGVFSKAL-GLAELYP------YFIPMLLAIPLL 900