Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 51.2 bits (121), Expect = 5e-11
 Identities = 56/290 (19%), Positives = 118/290 (40%), Gaps = 16/290 (5%)

Query: 54  VVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYR 113
           V++  +   S++L+++V  + T    +  +S  E   A+ + ++   + I   F + I  
Sbjct: 53  VLNRDNGHWSQELVQQVGGSPTFRSIELASSPHEVRLAIDTQRVLAVVEIGPTFSRDIEA 112

Query: 114 QEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVR 173
               +V    + +     ++V+  + +  G   A+    K  A++T            +R
Sbjct: 113 GRPAEVQMILDGRRSNASQIVSGYLGRIVGAVAAETPAGKRAASET------------IR 160

Query: 174 TQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQSPLTQ-- 231
            +    FN N  Y  F+V  +V ++  +  ++ T L +A   R  G    L  SPL    
Sbjct: 161 VEARNWFNPNLTYQWFMVPNLVASIALLIGLIVTALSVARE-RELGTFDQLIVSPLRTHE 219

Query: 232 -LTRTLLPYLPIFMLQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFL 290
            L   L+P + I +     +++    +   P+ G    L  +    + A V +G F   L
Sbjct: 220 ILLGKLIPPMMIGLFHITIYILAAVFIFGVPLRGSLFLLYGSAIFYLAAVVGLGLFISAL 279

Query: 291 TLDPARAMSFAGAFTAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEV 340
           ++   +A+  A  F  P+    G   P  +M +  Q    + P+ +++ +
Sbjct: 280 SMTQQQAILGAFLFMVPAMLLSGFATPIENMPSWLQPVTLINPLRYFLVI 329