Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 3/202 (1%)

Query: 54  VVDFSHSQLSRQLIREVDATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYR 113
           VVD  ++ LSR+LIR  DA+  + V++   SV EA   + S   +G +VIPA F + +  
Sbjct: 51  VVDLDNTSLSRELIRHADASPKIRVARAAGSVAEAQHYIASGDFHGLLVIPAGFKRDLLL 110

Query: 114 QEQPQVTTFYNSQMILVGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVR 173
            +   ++   ++   LV   +   +V A G   A+   +  + ++  +   A    +P+ 
Sbjct: 111 GKGATLSYGGDASYFLVYSALVEGLVTA-GMDAARSVQLLGMLSRGESFAGASLSLLPMH 169

Query: 174 TQITPLFNQNTNYAQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQSPLTQLT 233
               P +N    Y  ++V  +   +   T+++ T ++ A  +R  G   W   S L  L 
Sbjct: 170 LNAVPAYNPGLGYTPYVVPGLFLLILHQTLLIGTGILGAGQWRKAGY--WQQVSSLELLI 227

Query: 234 RTLLPYLPIFMLQGLGFLIWFY 255
             +  +  I+   G  ++ W Y
Sbjct: 228 GRIAAFGLIYAALGAFYMGWCY 249