Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 66/329 (20%), Positives = 139/329 (42%), Gaps = 21/329 (6%)

Query: 17  LRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVDATSTL 76
           L+ D+  F+ +  +P++  +   +  +    R LP  V+    S L R +++ ++ T+  
Sbjct: 37  LKRDRLTFAMIIVIPVMQLLLFGYAINT-TPRHLPTAVLLQEDSDLGRSILKALENTAYF 95

Query: 77  LVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVGKLVNS 136
             ++   SV E    + S ++   + IP  F++A+ R E+P +    ++   +      S
Sbjct: 96  KFTREVHSVAEFDDLLLSGRVLFGVEIPRGFERAVRRGEKPAILVAADATDPVAAGSALS 155

Query: 137 AVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLVSAIVP 196
           A+ Q   T               H  +     + P   +    +N   +    +V  +V 
Sbjct: 156 ALGQIVQT------------ALMHDRVGGDPANPPFEIRAHARYNPAASSRLNIVPGLVG 203

Query: 197 ALWQITIVVSTILILAANYRHYGLKSWLAQ--SPLTQLTRTLLPYLPIFMLQG---LGFL 251
            +  +T+++ T L +        +++ L+   +P+  +   +LPY+ +  +Q    LG  
Sbjct: 204 TILTMTMLIFTALSVTREIERGTMENLLSMPITPVEVMLGKILPYVGVGFIQASLILGIG 263

Query: 252 IWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAFTAPSFAF 311
           +  + V   P+ G  + L L  ++ +   + +G  F  L  +  +AM  +  F  PS   
Sbjct: 264 VLLFGV---PLRGSLAMLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFLPSILL 320

Query: 312 MGITFPASDMNTLAQAWRNLLPISHYIEV 340
            G  FP + M   AQ     LP++HY+ +
Sbjct: 321 SGFMFPFAGMPIWAQYIGECLPLTHYLRI 349