Pairwise Alignments

Query, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., ABC-type multidrug transport system, permease component from Dechlorosoma suillum PS

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 72/370 (19%), Positives = 153/370 (41%), Gaps = 30/370 (8%)

Query: 12  RQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVD 71
           +++  L+ D+  F  +  +PI+  +   +  +    + LP  +V       +R  +  + 
Sbjct: 19  KEFIQLKRDRLTFGMIVGIPIIQLLLFGFAINSD-PKHLPTAIVMADPGPFARSYVAAMQ 77

Query: 72  ATSTLLVSQHFASVDE--ASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMIL 129
            +    +     SVDE  A+  +  +Q+   +  P  F + + R + P +          
Sbjct: 78  NSDYFKI---VGSVDEKEANALLDRSQVQFVVTFPPGFHRDLVRGKAPTL---------- 124

Query: 130 VGKLVNSAVVQAQGTFNAQVDVMKNLATKTHTT-LAAMGRSV--PVRTQITPLFNQNTNY 186
              LV +          A + V+  L  +     L  + ++   P+  ++   +N     
Sbjct: 125 ---LVEADATDPMAAGGA-ISVLNKLGLEVFAPDLPGLEKTATPPLDLRVHRRYNPEGLT 180

Query: 187 AQFLVSAIVPALWQITIVVSTILILAANYRHYGLKSWLAQ--SPLTQLTRTLLPYLPIFM 244
           +  +V  ++  +  +T+V+ T L +         ++ LA   +P+  +T  ++PY+ I +
Sbjct: 181 SYNVVPGLLGVILTMTMVLMTGLAMTRERERGTFENLLATPATPVEVMTGKIVPYILIGL 240

Query: 245 LQGLGFLIWFYDVLRWPMFGHFSTLLLAQSITVVACVIMGAFFYFLTLDPARAMSFAGAF 304
           +Q    L+    +   PM G+   L     + + A + +G  F  +  +  +AM     F
Sbjct: 241 IQVTLILLAARFIFDVPMHGNLLLLYAVVLLFICANLTLGITFSSIARNQLQAMQMTFFF 300

Query: 305 TAPSFAFMGITFPASDMNTLAQAWRNLLPISHYIEVQVNQV---SYGLEAL-SSLQPMVN 360
             PS    G  FP   M   AQ   N+LP++H++ V V  +     G++ + SS+ P++ 
Sbjct: 301 FLPSMLLSGFMFPFRGMPEWAQVVGNVLPLTHFL-VLVRGILLKGNGIDMVWSSVWPILA 359

Query: 361 MWGYLLPLGL 370
               +L +GL
Sbjct: 360 FIAVVLGIGL 369