Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., hemolysin secretion protein D from Pseudomonas fluorescens FW300-N2C3

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 36/312 (11%)

Query: 8   LMTLTAVAVVGWIGY-RFYQAYQPEPVTL-QGQIESQQYSISSKVPGRIDQVLVRKGDQV 65
           L  L  +   G  GY +      PE +++  G++E+ +  I+SK PGR+ +VL  +GD+V
Sbjct: 13  LALLAVLLAAGGFGYWKSRHDRLPEGLSMGNGRLEATEVQIASKTPGRLAEVLANEGDKV 72

Query: 66  EKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAEL 125
            KGQL+  + +  ++A+  QA            EAE     + + A +      Q+   L
Sbjct: 73  VKGQLLARMDTRTLEAQRNQA------------EAEVLRARENLAATEANVHLRQSEQLL 120

Query: 126 AEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAALE 185
           A +   R   L+  G  S Q  D+ Q +   A    +AA                +A + 
Sbjct: 121 AHQELQRTRELFKRGFASGQVIDQQQARMDTANAAVNAA----------------RAQVS 164

Query: 186 KARMAAGA----VAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
            A  A GA    VA++ +   D+++++  DG +   L   GE+   G  V+ ++D  D +
Sbjct: 165 AANAAIGATLAQVAQLTSEIDDSRLRAPIDGVIQLRLAEPGEVLGAGGRVLLMIDPNDQY 224

Query: 242 AVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT 300
               +   +      G +    L AL  + +   ++ VA    F T +  +         
Sbjct: 225 MNLYLPASVAGKLAVGDEARVLLDALPERPLPATISFVAAKSQF-TPKEVETRDERQKLV 283

Query: 301 FEVEARPVTPTE 312
           F V+ R   P E
Sbjct: 284 FRVKVRLTRPGE 295