Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 10/250 (4%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK 91
           P T Q ++ +    ++S+V GR+ +V VR    V+ G ++F     E+D +  Q    + 
Sbjct: 50  PYTQQARVGAFVIPVASEVAGRVIRVDVRNNQDVKAGDVLF-----EVDQQPYQIAVDRA 104

Query: 92  AAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYND--GVVSEQKRDE 149
            A   +   + GA    I +A+     AQA    A +   R+  LY +  G +S +  + 
Sbjct: 105 RADLESTRRQIGASTAGIASAQANLRAAQANELKARQDNQRLEGLYREDPGTISVRLLEV 164

Query: 150 AQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSW 209
           ++   + A    +AA    Q A+E      +  AL   R AA A+++ E   ++T+I++ 
Sbjct: 165 SRANREQAVSQVAAAHAEVQRAREQEGGSEEDNAL--LRSAATALSKAELDLSNTQIRAR 222

Query: 210 FDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPAL-N 268
             G ++ +    G+ A  G PV+T++   D W   ++ E+ L     G   +  L A+  
Sbjct: 223 SAGLITDLRTDVGQFATAGSPVMTLIAIHDVWISADMTENNLGLVEVGTPVSIVLDAMPG 282

Query: 269 KSIEFKVTHV 278
           K  E +V  V
Sbjct: 283 KVFEGRVRSV 292