Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Multidrug resistance protein A from Pseudomonas fluorescens FW300-N1B4

 Score = 73.6 bits (179), Expect = 7e-18
 Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 10/220 (4%)

Query: 45  SISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQ--EAEN 102
           S+++KV G +  V V     V  G ++F +   +  A+L QA+A   AA A     +AE 
Sbjct: 69  SLAAKVAGYVTAVEVEDNQTVRAGDVLFRIDDRDYRARLAQAVANVSAAEARLTHVDAET 128

Query: 103 GAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTES 162
             +   I+ A+ Q   A A   LA KT+ R   L     VS+   DE  T    A+ T S
Sbjct: 129 QLQRALIRQAEAQRRSASAEMNLATKTHDRSQKLIVSNAVSQALVDETGTARSRAEATVS 188

Query: 163 AA-----LQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQV 217
           AA      Q  ++    A+ E   AA+ +A+ AA  +A+++  +  T + +  DG +   
Sbjct: 189 AASATVEAQQQRITVLVAQREAAIAAVAQAQ-AARDLAQIDLDS--TVVHAPVDGVIGNR 245

Query: 218 LMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQG 257
            +  G     G  ++ +V   D W V N +E  L+H   G
Sbjct: 246 QVRVGRFVTPGVSLLDIVPVNDVWVVANFKETQLEHIRPG 285