Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., Multidrug resistance efflux pump from Pseudomonas stutzeri RCH2

 Score = 79.7 bits (195), Expect = 1e-19
 Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 14/315 (4%)

Query: 2   KTVKTTLMTLTAVAVVGWIGYRFYQA--YQPEPVTLQGQIESQQYSISSKVPGRIDQVLV 59
           KT++  L  L A+ V+G + +   +         +  G+IE+ +  +++K+ GRI ++ V
Sbjct: 7   KTLRRVLFVLVALVVIGLLAWSELRTDGLGEGFASGNGRIEATEIDVATKLGGRIREISV 66

Query: 60  RKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAA--GALAQEAENGAREQQIQAAKDQWL 117
            +GD V+ GQ+I  + +  +DA+L QA A  + A    L  +A    RE +   A+   L
Sbjct: 67  DEGDFVQPGQVIARMDTEVLDAQLNQARAQVRQAENAILTAQALVTQRESEKATAEAVVL 126

Query: 118 KAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEG--- 174
           + +A    A+K + R   L     +  Q+ D+     Q+A+   +A+      A  G   
Sbjct: 127 QRRAELTAAQKRHQRTETLVGRNALPRQQLDDDLAAMQSAQAALAASRSQVLSADAGIAA 186

Query: 175 AREET--KQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVV 232
           AR +    Q+ALE A+    +V  ++A   D+++++     V   +   GE+   G  ++
Sbjct: 187 ARSQVIEAQSALEAAQ---ASVVRLQADITDSELKTDRVARVQYRVAQPGEVLGAGGKLL 243

Query: 233 TVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNK-SIEFKVTHVAVMGDFATWRSTD 291
            +VD  D +  F + E        G++    + A  +  I  KVT+VA +  F T ++ +
Sbjct: 244 NLVDLADVYMTFFLPERQAGRVAMGSEVRLVIDAAPQYVIPAKVTYVASVAQF-TPKTVE 302

Query: 292 ATQGFDLRTFEVEAR 306
                +   F V+AR
Sbjct: 303 TESEREKLMFRVKAR 317