Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., transporter from Sinorhizobium meliloti 1021

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 19/295 (6%)

Query: 45  SISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQA---IAGQKAAGALAQEAE 101
           +IS ++ G + +V VR  ++V  GQL+  +       KL QA   +A Q++A A + E E
Sbjct: 58  TISPQLSGYVAEVPVRDYEEVRAGQLLVRIDDRIYVQKLAQAKATLATQRSALANSFEQE 117

Query: 102 NGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTE 161
             A+   I A++ Q   A+AA   A  T+ R+  L + GV +    D+A+  ++ A    
Sbjct: 118 LSAKAG-IAASEAQLDGAKAALATARATWDRIRPLADKGVATRSDADQARAAFEQADAGV 176

Query: 162 SAALQMYQLAKEG-AREETKQAALEKARMAAGAVAEVEAYAAD---TKIQSWFDGEVSQV 217
             A+   +++++  A     +A LE +   AGA A VE    D   T+I +   G + ++
Sbjct: 177 KQAIANLEVSRQSLATTLGARAGLEGS--VAGAEAAVELAEIDLDNTRIVAPRAGRLGEI 234

Query: 218 LMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKSI---EFK 274
               G+    G  +++VV   + W V N +E  L     G   T  + ALN+ +     +
Sbjct: 235 GARVGQYVTAGTQLLSVVP-HEVWIVANFKETQLDGMRVGQPVTISVDALNRQVLRGHIE 293

Query: 275 VTHVAVMGDFATWRSTDATQGFDLRTFEVEAR----PVTP-TEGLRMGMSVVVKL 324
               A   +F+  R  +AT  F      +  R    P  P  + L  G+SVVV++
Sbjct: 294 RFSPAAGSEFSIIRPDNATGNFTKVAQRLGVRIAVDPEQPMADRLAPGLSVVVRV 348