Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 77/322 (23%), Positives = 131/322 (40%), Gaps = 9/322 (2%)

Query: 11  LTAVAVVGWIGYRFYQ-------AYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGD 63
           L A+   G  G  ++        A +P    L G ++ +Q S+  +V GRI ++ V +GD
Sbjct: 7   LVAIVAAGLAGAWWFDLPARLGFAREPRQAVLYGNVDIRQVSLGFRVSGRIAELRVDEGD 66

Query: 64  QVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQAAA 123
            V+ G +I  L +      +  A A  +   A   +   GAR  +I  A+    +  A  
Sbjct: 67  SVKAGDVIAKLDAEPFRQAVGAAEAEAEVTRATLAKLRAGARAAEIAQARATHEERLAEL 126

Query: 124 ELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQAA 183
           E A+  + R   L  +G +S+ + D+A     AA     +A +   L +EG R E   AA
Sbjct: 127 ENAKLAFERAKQLRPNGTISQAELDQANASRAAADARARSAREALVLLEEGNRAEDIAAA 186

Query: 184 LEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAV 243
             +A  A            DT++ +  DG +   +  +G +      V  +  T+  W  
Sbjct: 187 AAQANAATAKADSARISLEDTQLAAPSDGVILSRVRETGAIVSPADIVYVLSLTEPVWVR 246

Query: 244 FNVREDLLKHFTQGAQFTAYL-PALNKSIEFKVTHVAVMGDFATWRSTDATQGFDLRTFE 302
             V E  L     G + T     A ++  E  V  ++ + +F T +S +  +      + 
Sbjct: 247 AYVAEPDLGRVHPGMKVTITSDTAPDRIYEGTVGFISPVAEF-TPKSVETPELRTDLVYR 305

Query: 303 VEARPVTPTEGLRMGMSVVVKL 324
           +      P + LR GM V V L
Sbjct: 306 LRIVIANPGKDLRQGMPVTVHL 327