Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., secretion protein HlyD (RefSeq) from Shewanella amazonensis SB2B

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 74/257 (28%)

Query: 32  PVTLQGQIESQQYS-ISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQ 90
           P+   G I +   + +  ++ G++  +    GD+V KGQ +  L     D  L +A    
Sbjct: 55  PLEFSGTIRAANTTGVGFELAGKLSGLYADSGDRVRKGQQLAAL-----DTSLLKA---- 105

Query: 91  KAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEA 150
                          +Q++QAA  Q     A   LA+ T  R   L   G VS Q+ DE 
Sbjct: 106 --------------EQQELQAALSQ---NSADLSLAQSTLKRSLELKKQGYVSSQQLDEL 148

Query: 151 QTQWQAAKYTESAALQMYQLAKEGAREETKQAA------LEKARMAAGAVAEVEAYAADT 204
           + +  +                EGARE  K +       LEK+R+ A             
Sbjct: 149 EGRLGSL---------------EGARERLKASLYANTLKLEKSRLLAP------------ 181

Query: 205 KIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQG------- 257
                FDG +     + GE+ P G PV  +V+ +   A   V  D+ K  TQG       
Sbjct: 182 -----FDGSIGSRSFNLGEVVPLGQPVFVLVEDKAAQAHVGVPADIAKSLTQGQLMDLRV 236

Query: 258 --AQFTAYLPALNKSIE 272
               + A L  +N SI+
Sbjct: 237 GREHYRAVLAGINPSID 253