Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 1/295 (0%)

Query: 30  PEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAG 89
           P+P  +QG +E     + S   GR+  V VR+GD+V+ G  +F +      A  +QA A 
Sbjct: 15  PDPNLIQGYVEGDYLYVGSTTAGRLTAVDVREGDRVDAGDRLFGVDERAALALRDQARAV 74

Query: 90  QKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDE 149
              A A   +   G R +++        +A+AA   + +   R   L   G  S    D+
Sbjct: 75  LTEAEARLGDLRKGKRPEELAMLSAAVDEAKAALAYSLRDLGRQRGLVGSGAASAATLDQ 134

Query: 150 AQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSW 209
           AQ+     +     A+  Y LA +G R +   A       +  A+A  E   ++   Q+ 
Sbjct: 135 AQSLADRDQARFDRAISDYALALQGGRADAISAQQAVVEQSRAALARAEVDLSELSRQAP 194

Query: 210 FDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNK 269
               V  +L   GE+   G PVV ++  ++   VF V E  L     G +          
Sbjct: 195 GPALVEDILYRPGEVVAVGTPVVVLLPPENVKVVFFVPEPRLGALRIGQEVAFACDGCPS 254

Query: 270 SIEFKVTHVAVMGDFATWRSTDATQGFDLRTFEVEARPVTPTEGLRMGMSVVVKL 324
           ++   +  V+   ++ T     + +      + VEARP+ P + L  G  V V+L
Sbjct: 255 ALRATIGFVSSRAEY-TPPVIYSVETRAKLVYRVEARPLGPVQALHPGQPVDVRL 308