Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 8/296 (2%)

Query: 33  VTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKA 92
           +TL G ++ +Q  +  +V GRIDQ +V +GD V +G ++  L     D  +  A AG   
Sbjct: 39  LTLYGNVDIRQVQLGFRVSGRIDQAMVDEGDFVTEGTVLARLDVAPYDDAVRAAEAGVGE 98

Query: 93  AGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQT 152
             A   +   G R  +I  AK  + +  A    A + + + + L   G VS    D AQ 
Sbjct: 99  RQASLDKRVAGPRPAEIAQAKAVYAEHLANLTYARQDFDKADKLLPSGAVSRSLFDHAQA 158

Query: 153 QWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDG 212
           Q   A     AA +  +L +EG R E   AA      A   ++       DT++++  DG
Sbjct: 159 QRGVALARVDAAREALRLLEEGTRAEDIAAARASLLAAQADLSSARTARRDTELKAPADG 218

Query: 213 EVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLP-ALNKSI 271
            +   +   G +   G  V  +      W    V E  L     G         A +K  
Sbjct: 219 VILSRVREPGAIVASGDIVYVMSLKAPVWVRAYVSESNLGRVYPGLPVEVLTDGAPHKPY 278

Query: 272 EFKVTHVAVMGDFATWRSTDATQGFDLRT---FEVEARPVTPTEGLRMGMSVVVKL 324
              V  ++ + +F    +    +  DLRT   + +        +GLR GM V ++L
Sbjct: 279 RGTVGFISPVAEF----TPKTVETPDLRTDLVYRLRVVIAQADDGLRQGMPVTLRL 330