Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 12/258 (4%)

Query: 8   LMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEK 67
           ++ + AVA  G  G+R++   +    T    I+    +I+ KV G +D+V V   + V  
Sbjct: 34  VLVVGAVAAAGVFGWRWWTEGRFLETTDNAYIQGDITAIAPKVSGYVDEVAVGDNEVVSA 93

Query: 68  GQLIFTLLSPEIDAKLEQAIAGQ--KAAGALAQEAENGAREQQIQAAKDQWLKAQAAAEL 125
           GQL+  L S +   +++QA A    KAA   +  A    ++  I  A+     AQA  + 
Sbjct: 94  GQLLVRLDSADYRVQVDQARANAEGKAAELASIIANIDLQQTAIAQARGAMDAAQARFDR 153

Query: 126 AEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREE------T 179
           A K   R  +L   G  S Q  D A+ Q  +     +A L+    A +GA++        
Sbjct: 154 AAKDLARYQDLVGRGATSRQSLDSAREQATSG----AAELRSAAAALDGAQKRLAVLSAD 209

Query: 180 KQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQD 239
           + AA  + R A    A  E   A+T+I++   G V    + +G+    G  ++ +V  + 
Sbjct: 210 RDAAAAEVRSAQAQRALAEINLANTEIRAPIAGVVGNRGVRAGQYVAPGSALMAIVPLEG 269

Query: 240 TWAVFNVREDLLKHFTQG 257
            W   N +E  L     G
Sbjct: 270 LWIAANFKETQLGAMAPG 287