Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 74/249 (29%), Positives = 119/249 (47%), Gaps = 25/249 (10%)

Query: 37  GQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGAL 96
           G++ES+Q  I++K+ GRI +VLV++GD+VEKGQL+  +   +I A+L            L
Sbjct: 57  GRLESEQVEIATKLAGRIAEVLVKEGDEVEKGQLLVKMDVSDIQAQL------------L 104

Query: 97  AQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQA 156
           A EA+     Q    A+   L+ ++  +LA +   R   L+  G  + + RD    Q QA
Sbjct: 105 AAEAQERRAVQSKAVAEAMVLQRESEQKLAAQQLGRAEALFEKGFSTAEIRD----QRQA 160

Query: 157 AKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQ 216
           A+    AAL     AK    + T  AA++ AR     VA ++    D ++++   G +  
Sbjct: 161 AQNVADAAL---IAAKASLSDAT--AAIDAAR---AEVARIKTVLDDMQLKAPRRGRIQY 212

Query: 217 VLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNK-SIEFKV 275
            L  +GE+   G  V+T+VD  D +    V   +      G+     L A+ +  +  KV
Sbjct: 213 KLAQAGEVLGAGSRVLTLVDLTDVYMTVFVPASVAAALAYGSDARLILDAIPQYVVPAKV 272

Query: 276 THVAVMGDF 284
           T VA    F
Sbjct: 273 TFVASEAQF 281