Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 57/226 (25%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK 91
           P T++G    Q   I  KV G I+++LV +G  V+KGQL+FT+ +P+             
Sbjct: 57  PATIEG---IQNIDIRPKVDGFIEKILVDEGAVVKKGQLLFTINAPQY------------ 101

Query: 92  AAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQ 151
                         EQQ++ A+     A+A    A+ T  +   L    ++S+   D AQ
Sbjct: 102 --------------EQQVRTARAAISSAEADVNAAQLTVNKTKPLVEKDIISKYDLDAAQ 147

Query: 152 TQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFD 211
              Q                       +++AAL +A+     +   +     T I S  D
Sbjct: 148 LTLQ-----------------------SRRAALAQAK---AELVNAQVNLGYTSITSPVD 181

Query: 212 GEVSQVLMHSGELAPQGF--PVVTVVDTQDTWAVFNVREDLLKHFT 255
           G V  +   +G L       P+ TV +T   +A F++ E  L  F+
Sbjct: 182 GVVGSIPFRNGSLVSSSSTQPLTTVSNTSKVYAYFSLNEKQLLDFS 227