Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., efflux transporter periplasmic adaptor subunit from Pedobacter sp. GW460-11-11-14-LB5

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 25/194 (12%)

Query: 31  EPVTLQGQIESQ-QYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAG 89
           E VT  G+I+ + +  +SS+V G + ++ V++GD V+ GQL+  +    + +  E+ +  
Sbjct: 46  ETVTASGKIQPETEVKLSSEVSGEVVELKVKEGDIVKAGQLLCKVRPDVLQSGYERTV-- 103

Query: 90  QKAAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDE 149
                     A   A++  + +A+ Q ++ QA    A+ TY R   L+N  V+S  + D 
Sbjct: 104 ----------ASFNAQKASVASAQQQLVQNQANFVNADATYKRNVELFNKKVISASEFDA 153

Query: 150 AQTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSW 209
           A+  +  AK            A   + +E+   A          V E  A  A T I + 
Sbjct: 154 AKAAYLTAK------------ANLASAKESVIGAKFTLEQTGANVKEAGANLAKTTIYAP 201

Query: 210 FDGEVSQVLMHSGE 223
            DG VS++ +  G+
Sbjct: 202 VDGVVSKLSIELGD 215