Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 68/252 (26%), Positives = 122/252 (48%), Gaps = 16/252 (6%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK 91
           P+T   ++ +    ++S+V G I +V VR    VE G+ +F     +ID +    +A Q 
Sbjct: 34  PMTSDARVHAYLVRVASEVAGNITEVSVRDNQIVEAGEPLF-----QIDPR-NYRLAMQS 87

Query: 92  AAGALAQEAEN-GAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEA 150
           A   L+   +N GA    ++ A+ + + A AA   A++   RV+ L   GV+S+ + D A
Sbjct: 88  AQANLSLAGQNIGASTAAVEVAQAKVVDAIAARNNAKEQAARVSELAGQGVLSQAELDNA 147

Query: 151 QTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAAD---TKIQ 207
                 A+    A L+  + +   AR+    A  +  ++ A A+A +E    D   T+++
Sbjct: 148 IE----ARDRTQANLEAAEASLVQARQALGPAGQDNPQILA-AMANLEKAQLDLQKTQVK 202

Query: 208 SWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPAL 267
           +   G V+ + +  G+ A  G P++T +D +  W    VRE+ L+H   G +    L AL
Sbjct: 203 APSKGVVTNLQLTLGQRANVGSPMLTFIDPRGVWISALVRENSLEHIKVGNKVEIVLDAL 262

Query: 268 -NKSIEFKVTHV 278
             + +E KV  +
Sbjct: 263 PGRVLEGKVDSI 274