Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 11/228 (4%)

Query: 32  PVTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK 91
           P+T Q ++  Q   IS +V G I QVL+     V+ G  + T+     +  ++ A    +
Sbjct: 46  PMTDQARVNGQLIRISPEVSGPISQVLITNNSIVKAGDELVTIDPRPFELAVKAAKFDLQ 105

Query: 92  AAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQ 151
            A A + EA++ A    I  A+   + A+     A+K   R   L N G +S+   D   
Sbjct: 106 QA-AQSYEADSAA----ISVAQANEVAARVKVNNAKKNVERNRVLANKGTISQAVMDNII 160

Query: 152 TQWQAAKYTESAALQMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAA--DTKIQSW 209
            + + A+    A L     A E A++E     ++   + +    + +A      TK+ + 
Sbjct: 161 AELETAQ----AGLAQASSALEKAKQEFGPRGIDNPEIQSVLNRQEQALLNLNHTKLTAP 216

Query: 210 FDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQG 257
            +G ++ + +  G+ A  G P++T ++  + W    VRE+ L H   G
Sbjct: 217 ANGVITNMDVAVGDYAAAGQPLLTFINNNNLWLTAMVRENSLAHLKPG 264