Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., secretion protein HlyD family protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 86/330 (26%), Positives = 147/330 (44%), Gaps = 14/330 (4%)

Query: 4   VKTTLMTLTAVAVVGWIGYRFYQAYQPEP----VTLQGQIESQQYSISSKVPGRIDQVLV 59
           +K  ++ L  +A+    G   ++A +P P    V L G ++ +Q S++ K   R+ +VL 
Sbjct: 1   MKKRILVLAVLALCMVGGVLAWRALRPVPDAGPVVLYGNVDLRQVSLAFKDAERVARVLA 60

Query: 60  RKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKA 119
           R+GD++  G L+  L +  +D ++ +A A   A  A     ENG+R Q+ + A+     A
Sbjct: 61  REGDRLAPGALVAVLETDRLDREISRAKARVAAQAAALARLENGSRPQEKRRARADADAA 120

Query: 120 QAAAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREET 179
               + A +TY R+  L   G   EQ  D+A      A      A     L +EG R E 
Sbjct: 121 AVELDNARRTYDRLRALSGTGAAREQDVDDALAAHDRAAARLRVAQAQLGLVEEGPRRED 180

Query: 180 KQAALEKARMAAGA----VAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVV 235
               +++AR A  A    +A +E   AD+++++   G V   L+  G++A    PV TV 
Sbjct: 181 ----IDEARAALAAQRADLAVLEQRRADSELRAPSSGVVRSRLLEPGDMASAQRPVCTVA 236

Query: 236 DTQDTWAVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQ 294
            T   W    + E  L    +G      + A   + +E  +  ++   +F T R+ +  +
Sbjct: 237 ITDPKWVRAYLTETQLGRVHEGMPAEVAIDARPGQPLEGWLGFISPTAEF-TPRNVETPE 295

Query: 295 GFDLRTFEVEARPVTPTEGLRMGMSVVVKL 324
                 +E       P + LR+GM   V L
Sbjct: 296 LRTSLVYEARVFVRDPDDVLRLGMPATVTL 325