Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 82/325 (25%), Positives = 139/325 (42%), Gaps = 9/325 (2%)

Query: 2   KTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRK 61
           K +   ++ L   AV+G  G+ +YQ+ Q + +TL G ++ +  ++S +V GR+  + V +
Sbjct: 3   KPLIIVVLLLLLAAVLGG-GWWWYQSSQQKTLTLYGNVDIRTVNLSFRVGGRLASLSVDE 61

Query: 62  GDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQA 121
           GD ++ GQ +  L     +  L+QA A    A A       G R ++I  A     +AQA
Sbjct: 62  GDAIKAGQTLGELDRAPYENALQQAQANVSTARAQYDLMMAGYRSEEIAQAAAAVNQAQA 121

Query: 122 AAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQ 181
           A + A+  Y R   L     +S    + A++    A+ T  +A    +  + G R +   
Sbjct: 122 AYDYAQNFYQRQLGLRKSSAISANDLENARSSRDQAQATLKSAQDKLRQYRAGNRPQEIA 181

Query: 182 AALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTW 241
            A      A  A+A+ +    DT + S  DG +    +  G +   G  V+T+  T   W
Sbjct: 182 QAKASLEQAQAALAQAKLDLHDTTLTSPSDGTLMTRAVEPGSMLSAGGTVMTLSLTHPVW 241

Query: 242 AVFNVREDLLKHFTQGAQFTAYLPAL-NKSIEFKVTHVAVMGDFATWRSTDATQGFDLRT 300
               + E  L     G +   Y  +  +K    K+  V+   +F    +    +  DLRT
Sbjct: 242 VRAYIDEKNLGQAQPGREVLLYTDSRPDKPYRGKIGFVSPTAEF----TPKTVETPDLRT 297

Query: 301 FEVEARPVTPT---EGLRMGMSVVV 322
             V    +  T   + LR GM V V
Sbjct: 298 DLVYRLRIVVTDADDALRQGMPVTV 322