Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia sp. UNC404CL21Col

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 5/257 (1%)

Query: 33  VTLQGQIESQQYSISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQK- 91
           V+  G+IE+ +  +++K+PGR+  +LV +GD V  GQ +  +    ++A+ ++A+A Q+ 
Sbjct: 39  VSGNGRIEATEIDVATKLPGRVQDILVDEGDFVTAGQPLAHMQVQTLEAQRDEALARQQQ 98

Query: 92  -AAGALAQEAENGAREQQIQAAKDQWLKAQAAAELAEKTYLRVNNLYNDGVVSEQKRDEA 150
             +   + +A+   RE   QAA  Q    ++  + A++   R   L ++G  S Q+ D+ 
Sbjct: 99  SVSAVASAQAQVAVREADRQAALAQIALRESDLDAAQRRLARSETLSHEGASSMQELDDD 158

Query: 151 QTQWQAAKYTESAALQMYQLAKEGAREETKQAALEKA--RMAAGAVAEVEAYAADTKIQS 208
           + + ++AK    AA    + A+        Q A   A  + A   V  ++A   D+ + +
Sbjct: 159 RARVRSAKAALVAARAQAEAAQAAVLAARTQVAGAGATVKAADATVLRIKADIDDSALTA 218

Query: 209 WFDGEVSQVLMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALN 268
             D  V   +   GE+   G  ++ +VD  D + +F V E        G++    L A  
Sbjct: 219 PRDARVQYRIAQPGEVLAGGGRLLNLVDLSDVYMIFFVPETDAGRIAMGSEVRIVLDAAP 278

Query: 269 K-SIEFKVTHVAVMGDF 284
           +  I  +V+ VA    F
Sbjct: 279 QYVIPARVSFVASTAQF 295