Pairwise Alignments

Query, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., hemolysin D from Burkholderia phytofirmans PsJN

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 83/294 (28%), Positives = 120/294 (40%), Gaps = 19/294 (6%)

Query: 46  ISSKVPGRIDQVLVRKGDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAR 105
           ++ KV G +  VLV     V    ++  L + + DA+L QA A  ++A A   E +   +
Sbjct: 41  MAPKVNGFVTDVLVHDNQFVHANDVLIRLDARDYDARLAQATAEVQSAQASVTELQ-AKK 99

Query: 106 EQQIQAAKDQWLKAQAA-AELAEKT--YLRVNNLYNDGVVSEQ---KRDEAQTQWQAAKY 159
             Q+    +Q  + +A+ AEL        R   L  D  VS Q   + D   T+  AA  
Sbjct: 100 SLQLATINEQAAEVRASGAELTRSAADQTRYRELVKDDAVSNQVVERADADLTKAHAAVD 159

Query: 160 TESAAL--QMYQLAKEGAREETKQAALEKARMAAGAVAEVEAYAADTKIQSWFDGEVSQV 217
             SAAL     Q+A   A+    +A +  A+ A    A    Y   T I+S  DG V   
Sbjct: 160 RSSAALIAAQRQIAVLDAQIGDAEARIATAQAAQRVAALNVEY---TTIRSPIDGYVGNR 216

Query: 218 LMHSGELAPQGFPVVTVVDTQDTWAVFNVREDLLKHFTQGAQFTAYLPALNKSIEFKVTH 277
               G LA  G  ++TVV +   W   N +ED LK    G      L A +  I   V  
Sbjct: 217 TARVGLLANTGVSLLTVVPSSGLWIDANFKEDQLKKMRVGDSVDVDLDASSTPIHGVVES 276

Query: 278 V--AVMGDFATWRSTDATQGFDLRTFEVEAR-----PVTPTEGLRMGMSVVVKL 324
           +  A    F+   + +AT  F      V  R     P +    LR G+S  VK+
Sbjct: 277 LAPATGATFSVLPAENATGNFTKIVQRVPVRVRLDVPKSMQGVLRPGLSATVKV 330