Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 104/476 (21%), Positives = 186/476 (39%), Gaps = 68/476 (14%)

Query: 5   SLSLAI-CSILFMPIAHAAPLS--------FQEAWDLLQQQNNSLAAQRANVERYAHLKD 55
           SL+LA+ C+   M  A  APL+        +QEA D     N  LAA RA       +  
Sbjct: 6   SLALAVSCASNGMAWAAEAPLTTRTDLVSVYQEAVD----NNADLAAARAQYGAQKEVVP 61

Query: 56  ATQNLNLPSVSVGA--NFTRLDQDVTLSGKQIVDSAGGIDPNLIASLSPSLLPLVTHLGA 113
             +   LP++S GA  N TR + D                P + A+ S ++         
Sbjct: 62  QARAGLLPNLSAGADLNNTRTELD---------------QPAMTANRSSTVY-------- 98

Query: 114 AKSTITERDIFTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYY 173
            ++T+++            PIF   R    Q AA   +E+A  QL+   Q      A+ Y
Sbjct: 99  -QATLSQ------------PIFRADRWFQLQ-AAKSVDEQASLQLSATEQNMILQSAESY 144

Query: 174 FSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQK 233
           F+V+ +++ LA+  A E    +  D + +    G     + LQ+ AS D A+  R  AQ+
Sbjct: 145 FNVLRSQDNLASTKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRILAQR 204

Query: 234 TLDIAQSALTQILGATETVEPSGMLFINTSLPP----MHAFIEQTLNTYPGLSLLDAKEK 289
            +D A  AL  +    +     G++     LPP      A+++        L   +    
Sbjct: 205 QVDDAFEALITLTN-RQYNSLQGIVHTLPILPPAPNDAKAWVDTAAKQNLNLLASNYAVT 263

Query: 290 QASSLIKAEQGKYYPEVYLYGDYSLHEDDSLA-SQMKP----------DWLVGVGVNIPL 338
            A   ++  +  + P +     Y   ++D L  +   P             +G+ ++IPL
Sbjct: 264 AAEDTLRQRKAGHAPTLDAIAQYKKGDNDGLGFTNPNPTGQRYGGDAEQRTIGLQLSIPL 323

Query: 339 IENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQ 398
                 S QV+ + S + Q    +   ++ +       +      +E+V     S+   Q
Sbjct: 324 YSGGLTSSQVRESYSQLTQTEQQREALRRQVVENTRNLHRAVNTDVEQVQARRQSIISNQ 383

Query: 399 ENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLISLNKLLALSSEMS 454
             +   +  +  G    VDV+DA+  L +     + A ++Y++   +L   +  +S
Sbjct: 384 SAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNARYDYILDNLRLKQAAGTLS 439