Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., Heavy metal RND efflux outer membrane protein, CzcC family from Pseudomonas fluorescens FW300-N1B4

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 25/323 (7%)

Query: 119 TERDIFTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVL 178
           T RD  T+++    PI  GG+  A  D A+  ++ A  +L  +  A   D+ + + S   
Sbjct: 86  TRRDSRTTTVMLSQPIELGGKRGARIDVASRAQDAAGIELERKRYALRADVIQAFNSAQT 145

Query: 179 AKEVLATRIAVEEGLTQHRDNALKLEQ----QGQIAHVERLQADASLDKAKVERKKAQKT 234
           A++    R+ +     Q  ++ L++ Q     G+ + VE  +A   L + ++E  +A++ 
Sbjct: 146 AQQ----RLQLSRQSLQLAEHGLRVAQGRIEAGKSSPVEGTRAQVQLSEVRLELSRAERD 201

Query: 235 LDIAQSALTQILGA---TETVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEKQA 291
              A   L Q++G+   T T   +    + T  PP    + + LN    L L   +  Q 
Sbjct: 202 QANAYQQLAQVMGSPLPTSTTVQAATQSMPTVSPPTR--LLERLNETAELRLAKLQIDQR 259

Query: 292 SSLIKAEQGKYYPE--VYLYGDYSLHEDDSLASQMKPDWLVGVGVNIPLIENSGRSEQVK 349
            + +  E+ +  P+  V +   YS  E + +        +VG+ V IPL   +     V 
Sbjct: 260 EASLGLEKSQRIPDLTVSIGSQYSETERERVN-------VVGLSVPIPLFNRN--QGNVL 310

Query: 350 AANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSS-LNLAQENLRLRQKAF 408
           AA    +Q R L+   +  L   ++ T  + + A  EV   N + L  AQ  +    + F
Sbjct: 311 AAARRSDQARDLRNATELRLRTQIQTTLEQWQTANGEVAAFNQTILPAAQSAVDSATRGF 370

Query: 409 SQGLSTSVDVVDAELYLASIRTQ 431
             G    +DV+DA+  L S R+Q
Sbjct: 371 EMGKFGFLDVLDAQRTLISARSQ 393