Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 71/361 (19%), Positives = 152/361 (42%), Gaps = 31/361 (8%)

Query: 104 LLPLVTHLGAAKSTI----TERDIFTSSIRAI-----------WPIFTGGRITAAQDAAA 148
           LLP VT  G+    +    T+R+I+ +S  ++           W  +   + T  Q    
Sbjct: 77  LLPQVTANGSYNRILRKDDTQREIYNNSSYSLNLTQYLYNKQAWEAYQKAKSTTEQKGHQ 136

Query: 149 GKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQ 208
            ++ +A++ +         DLAK YF  + A + L   +A      +  D    +  +  
Sbjct: 137 AEDAQAEATV---------DLAKRYFQALSADDELELIMAERRATQKSLDRVSAMYDKKM 187

Query: 209 IAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGATETVEPSGMLFINTSLPP-- 266
               + L   A +D    +   A+  + ++++AL++I+G   T EP   +  + +L    
Sbjct: 188 AVVTDLLDLKARVDLLAAQEVDARNQIRLSRAALSEIVGRPIT-EPLSRIRNDIALQAPS 246

Query: 267 --MHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVY--LYGDYSLHEDDSLAS 322
             M  ++ Q +++ P L   ++    A++ ++  +G +YP +   L    S    D+  S
Sbjct: 247 KSMDTWVAQAIDSNPLLKARESSLDVANAAVREGKGGHYPTLTFTLGAQQSDVGYDNTLS 306

Query: 323 QMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQ 382
                ++  +GV +P+      S +V+   +            ++ +       YL A  
Sbjct: 307 PRSDSYVATIGVRVPIYSGGSTSARVRGLYNEQLATEQDVESVRRQVVKETTNAYLTAFS 366

Query: 383 ALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLIS 442
           ++E++    ++L  A+++    QKAFS G+  +VDV+ +       R     A ++++ +
Sbjct: 367 SVEKIRANKNALASAEQSSIAAQKAFSYGVVNAVDVLTSVQNEFKARRDLLRAQYDFITN 426

Query: 443 L 443
           L
Sbjct: 427 L 427