Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., TolC family protein from Parabacteroides merdae CL09T00C40

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 90/430 (20%), Positives = 170/430 (39%), Gaps = 41/430 (9%)

Query: 24  LSFQEAWDLLQQQNNSLAAQRANVERYAHLKDATQNLNLPSVSVGANFTRLDQDVTLSGK 83
           L+ +E  +L  Q N  L      ++   + K+A      P +S    +    +D+ L   
Sbjct: 23  LTLEECRELAIQNNKELKISGEKIKMAGYEKNAAFTKYFPQLSATGAYMWNQKDINLL-- 80

Query: 84  QIVDSAGGIDPNLIASLSP-SLLPLVTHLGAAKSTITERDI---FTSSIRAIWPIFTGGR 139
                 G +  ++  +L P + LP+   L      +   DI   +  S+  + P+F GG+
Sbjct: 81  ----DMGALSTSIGGALGPIAQLPVFGKLMEGVDDLQHLDIQNIWVGSVSLVQPVFMGGK 136

Query: 140 ITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDN 199
           I          ++ A+S    ++Q       + Y+ V+          A  + L +   +
Sbjct: 137 IINYNQITKYAKQLAESMNDQQLQDVICKTDETYWQVISLVNKKKLADAYVDLLRKTDHD 196

Query: 200 ALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILG---------ATE 250
              +  +G     + L     L++A++ + K    L +++  L QI G         A E
Sbjct: 197 MTAMINEGVATEADGLSVKVKLNEAEMAQTKVDNGLALSRMLLAQICGLPLEDPLVLADE 256

Query: 251 TVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYG 310
            +E        T+     AF+ +  N    L L     K+   ++ ++     P V    
Sbjct: 257 DIESFLTEPSVTAADVNEAFMNR--NELKSLDLATKIYKRKERIVLSDM---LPNVAFMA 311

Query: 311 DYSLHEDDSL---ASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQ 367
           +Y +   +S+    ++    + VGV V +PL   SG  E     NSA  + R +K+   Q
Sbjct: 312 NYLVTNPNSMNGFKNEFAGMFNVGVMVKVPL---SGWWEGSYKRNSARAETR-IKSLELQ 367

Query: 368 DLSVLVEKTYLEAEQALEEVTGLNSSLNL-------AQENLRLRQKAFSQGLSTSVDVVD 420
           D     EK  L+  Q++ +V   N  L +       A+ENLR     F +G+  +++++ 
Sbjct: 368 DAR---EKVELQVNQSVYKVNEANKKLIVSTRNMENAEENLRHANLGFEEGVIPALNLMQ 424

Query: 421 AELYLASIRT 430
           A+    S R+
Sbjct: 425 AQTAWVSARS 434