Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., TolC family protein from Parabacteroides merdae CL09T00C40

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 107/483 (22%), Positives = 200/483 (41%), Gaps = 45/483 (9%)

Query: 1   MKVKSLSLAICSILFMPIAHAAPLSFQEAWDLLQQQNNSLAAQRANVERY--------AH 52
           MK   L+ A+C   ++P+     L+ ++A D+ ++ + SL     N+ERY        A 
Sbjct: 9   MKKIILTAAVCLGGYVPLQGQVSLTIEKAMDIAEEHSPSLRRSHMNLERYQQNLVAQRAS 68

Query: 53  LKDA-TQNLNLPSVSVGANF-TRLDQDVTLSGKQIVDSAGGIDPNLIASLSPSLLPLVTH 110
           LK   + NLN    S   +F  RL Q  T    +   + G    +     +  +L L+  
Sbjct: 69  LKSKFSLNLNPVDYSKSRSFDNRLSQWYT---NERFSATGTFQVDQPILWTDGVLSLINR 125

Query: 111 LGAAKS------TITERDIFTSSI--RAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEI 162
            G   +      T T    F++ +  +   PIFT  +            E A    A++ 
Sbjct: 126 FGWQDNNSNIDGTKTSNKAFSNDLYLQLSQPIFTYNKRKMELQQIEYDYENANISYALQR 185

Query: 163 QARYEDLAKYYFSVVLAKEVLATRIAVEEGLT--QHRDNALKLEQQGQIAHVERL-QADA 219
            +  +D+ + ++SV +A+  LA      E LT  Q     +K + +  +A  + L QA+ 
Sbjct: 186 LSTEKDITQQFYSVYMAQSQLAI---TREELTNAQQSYEIIKNKVEADLAARDELFQAEV 242

Query: 220 SLDKAKVERKKAQKTLDIAQSALTQILGATETVEPSGMLFINTSLPPMHAFIEQTLNTYP 279
           +L  A+   ++ Q +L+ ++  L Q LG    +    M+F    + P+   +E+ +    
Sbjct: 243 NLASARSSLEEQQVSLENSKDQLKQTLGMD--LNEDIMVFAEVQIKPVEVNLEKAIQH-- 298

Query: 280 GL-SLLDAKEKQASS------LIKAE-----QGKYYPEVYLYGDYSLHEDDSLASQMKPD 327
           GL S L+ ++++  S      +IK +     +G       L GD    E         P 
Sbjct: 299 GLESRLELRQREIESKELAFDMIKTKALNEFKGDIALSFGLIGDNRHLEKIYNNPTQNPR 358

Query: 328 WLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEV 387
             V +  ++P+ +   +  +VKA   A    R    + K ++ + + +T+   E  L ++
Sbjct: 359 --VAISFSVPIFDWGEKKARVKAQEVAQKINRLEFHEDKVNIELNIRQTWRNLENLLSQI 416

Query: 388 TGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLISLNKLL 447
                ++  AQ    L    + +G  T +D+   +  L++ +   + A  NY I L  L 
Sbjct: 417 KIAKQNVANAQRTYDLNLTRYREGDITGMDMNQFQTQLSNKKIAYTQALINYKIELLNLK 476

Query: 448 ALS 450
            LS
Sbjct: 477 ILS 479