Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score = 61.6 bits (148), Expect = 5e-14
 Identities = 80/375 (21%), Positives = 156/375 (41%), Gaps = 30/375 (8%)

Query: 101 SPSLLPLVTHLGAAKSTITERDIFTSS--IRAIWPIFTGGRITAAQDAAAGKEEEAQSQL 158
           +P +  LV + G     I     + SS  ++    +F     T  Q A + +E    +  
Sbjct: 79  NPIIGQLVANFGGQTQAIKLGQNWNSSAGVQLSQQLFNQQVFTGLQAARSSEEYYNLTSQ 138

Query: 159 AMEIQARYEDLAKYYFSVVLAKE---VLATRIA----VEEGLTQHRDNAL--KLEQQGQI 209
             E Q   E +A  Y+ V++ ++   V+ T I     VE+ ++    N L  K++    +
Sbjct: 139 LTEEQI-IELVANNYYQVLVNRQQLNVIDTNIKNVKIVEKIVSNQYKNGLARKIDVDRIM 197

Query: 210 AHVERLQADASLDKAKVERKKAQKTLDIAQSALTQI-LGATETVEPSGMLFINTSLPPMH 268
            ++  L          + + + Q    +  S  TQI L ATE  E        T+LP   
Sbjct: 198 VNLTNLNTQREQVINAITQLENQLKFSMGMSVATQINLPATELTEV-------TTLPVFT 250

Query: 269 AFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYGDYSLHEDDSLASQMKPDW 328
             I+    T   + LL+ ++K  S   KA   +YYP + L G+Y+          +K + 
Sbjct: 251 DSIDLANRTE--VKLLNNQDKLLSLQRKAYVAEYYPSLALTGNYTYSSQSDSFDFLKSNA 308

Query: 329 L--------VGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEA 380
                    VG+ + +P+        +++ A+  + + +  + ++   L++  E   ++ 
Sbjct: 309 AAIGYGASAVGLTLRVPIFNGFLTRSKIRQADVDIKKAKEDRRESVNALNLAYENAKIQL 368

Query: 381 EQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYL 440
              L  +     + +LAQE  +  Q  ++ GL++  D++D E  L S +   + A  NY 
Sbjct: 369 RNNLNTIKSQRKNADLAQEIYKSTQNNYNNGLASLTDLLDTENALTSAQNSYTQALLNYK 428

Query: 441 ISLNKLLALSSEMSS 455
           I+  +L+  +  + S
Sbjct: 429 IAEIQLIKSNGNIKS 443