Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., outer membrane protein from Dechlorosoma suillum PS

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 27/308 (8%)

Query: 146 AAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQ 205
           AAA ++   Q+     +QA Y+         V A E         E  +    NA     
Sbjct: 160 AAATQDSTVQAVFLAALQAYYQ---------VQATEAALVAARESERASLESFNAADARY 210

Query: 206 Q-GQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGATETVEPSGMLFINTSL 264
           + G     +RLQA  +  +A ++R +A +    AQ  L  ++G  E   P  ++     +
Sbjct: 211 KVGTATPADRLQAQTAYSQASLKRIQADRDFKNAQGTLANVIGG-EAHRPPALVPATPVV 269

Query: 265 PP-------MHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYGDYSLHED 317
            P       + A + +     P L   +A+ + A + ++A +    P + L    +  + 
Sbjct: 270 APTREFTADVDALVAEARRRRPDLVAAEAQYQAAQANVEAARAAGLPTLSLTAGPAYQD- 328

Query: 318 DSLASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTY 377
             L   +     +GV +N+PL      + +V+ A S        + + +Q +++ V K Y
Sbjct: 329 --LGGNVSNTSSIGVTLNVPLFTGFSTTYKVRNAESLKEAREAQRERIRQQVALDVWKAY 386

Query: 378 ---LEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSL 434
              + A Q+L+    L  S   A++    R KA   GL + +DV++A+  LA+ R Q+  
Sbjct: 387 QGLITAGQSLQTTADLLVSAEAAEKVALGRYKA---GLGSILDVLNAQSALAAARQQRVQ 443

Query: 435 ASFNYLIS 442
           A+F + +S
Sbjct: 444 ATFEWNVS 451



 Score = 32.3 bits (72), Expect = 4e-05
 Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 14/159 (8%)

Query: 271 IEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYLYGDYSLHEDDSLASQMKPDWLV 330
           +E+ L   P    + A  +  ++L+   Q  Y P + L    S + +DS   +       
Sbjct: 73  VERALCHNPQTREVWANARAQAALVGVAQAAYLPGLSLSAGQSRNRNDSRKPESYTQKNA 132

Query: 331 GVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGL 390
           G+ ++  L +   R+       + +   R L A A       V+  +L A QA  +V   
Sbjct: 133 GLTLSYLLFDFGARA-------ATLENARQLLAAAAATQDSTVQAVFLAALQAYYQVQAT 185

Query: 391 NSSLNLAQENLRLRQKAFSQ-------GLSTSVDVVDAE 422
            ++L  A+E+ R   ++F+        G +T  D + A+
Sbjct: 186 EAALVAARESERASLESFNAADARYKVGTATPADRLQAQ 224