Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., type I secretion outer membrane protein, TolC family from Marinobacter adhaerens HP15

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 27/330 (8%)

Query: 145 DAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLE 204
           DA+  + E A+++  +  Q    D+A  YF+V+ A++ + T  A E  + +  + A +  
Sbjct: 105 DASKFQTESARAEYNLAQQQLILDVATAYFNVLRARDTVTTARATEAAIQRQYEQAQERF 164

Query: 205 QQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGATETVEPSGMLFINTSL 264
             G IA  E  +A AS D +K +R  A+  L++A+  L ++ G  E  E    L  N  L
Sbjct: 165 DVGLIAITEVYEARASYDDSKSQRIAAENQLNVAREQLARLTG--EYAEELDNLRQNFPL 222

Query: 265 ---PPMH------AFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEVYL---YGDY 312
               PM         +EQ  +    L  L+A E   + L +A+ G +YP + L   YG  
Sbjct: 223 GRPDPMDPSAWEATALEQNWSIQSALFELNANE---AGLREAKAG-HYPTLDLNASYGKT 278

Query: 313 SLHEDDS----LASQM---KPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQA 365
            L+  D     + SQ         +G+ +N+PL    G    V+   S V          
Sbjct: 279 DLNGIDGANAPITSQQDGTTTRGTIGLTLNVPLYSGGGTQAGVRQQRSLVTVAEQSLNTV 338

Query: 366 KQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDAE-LY 424
           ++D+ V     +L     +E  + L  ++   +  L   +  +  G    V+V+DAE  Y
Sbjct: 339 RRDVRVNTRSLFLTVNNNVETASALEQTIVSRRSALDATRAGYEVGTRNIVEVLDAERAY 398

Query: 425 LASIRTQQSLASFNYLISLNKLLALSSEMS 454
             ++R   + A ++Y+I+  +L   +  +S
Sbjct: 399 YVALRDYAN-ARYDYVINSLQLKQAAGTLS 427