Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., outer membrane efflux protein from Marinobacter adhaerens HP15

 Score = 70.9 bits (172), Expect = 7e-17
 Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 21/327 (6%)

Query: 128 IRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLATRI 187
           +R    ++ G R    Q  A       Q +L     A    +   YF ++LA++ L T  
Sbjct: 38  VRVTQEVWMGNRGDLGQSRAQSTLTSQQQELEYLKVATKARVRSAYFKILLAQKELETAS 97

Query: 188 AVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILG 247
              E + + ++      ++G+   ++   A   L +AK ++ +A++ L  ++  LT++LG
Sbjct: 98  RTVELMRRTKELVEVSVERGKQTRIDLNTAVIGLARAKNQKAEAEQKLRQSKIDLTEVLG 157

Query: 248 A--TETVEPSGMLFI-NTSLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYP 304
              ++ VE  G L +   +LPP +  +         L    A+     S +K  +    P
Sbjct: 158 VSPSDAVEVLGELNVARANLPPTNRLVAMAQRQRGDLKAAAARIAANESGLKLAKSLTIP 217

Query: 305 EVYLYGDYSLHEDDSLASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQ 364
            + ++G Y   E  +         L G GV++PL      S + + A SA  ++  L+A+
Sbjct: 218 NLKVFGFYEREERSN---------LFGAGVSMPLTVFHDYSGEKRKA-SAQLKISELEAE 267

Query: 365 AKQDLSVLVEKTYLEA----EQALEEVTGLNSS-LNLAQENLRLRQKAFSQGLSTSVDVV 419
           A   L +  E+  + A    E A+  +  +N S L  ++E L+L QKA   G   + DV+
Sbjct: 268 A---LRLATERQVVSAVAQYESAVRRLRQMNESILERSEETLQLMQKALQAGKVDASDVL 324

Query: 420 DAELYLASIRTQQSLASFNYLISLNKL 446
            A+  L S+R +      +Y+ ++  L
Sbjct: 325 AAQDNLLSVRKEYVQVQHDYIDAVRAL 351