Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., outer membrane channel protein TolC from Klebsiella michiganensis M5al

 Score = 61.6 bits (148), Expect = 6e-14
 Identities = 77/333 (23%), Positives = 134/333 (40%), Gaps = 34/333 (10%)

Query: 170 AKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERK 229
           A  YF V+ A + L+   A ++ + +  D   +    G +A  +   A +  D       
Sbjct: 132 ATAYFKVLAAIDTLSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNARSQYDAVLANEV 191

Query: 230 KAQKTLDIAQSALTQILGA--TETVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAK 287
            A+ +LD A   L Q+ G    E    +   F  T    ++A +++  N    LSLL A+
Sbjct: 192 TARNSLDNAVEELRQVTGNYYPELASLNVDGFKTTKPSAVNALLKEAENR--NLSLLQAR 249

Query: 288 EKQ--ASSLIKAEQGKYYPEVYLY-----------GDYSLHEDDSLASQMKPDWLVGVGV 334
             Q  A   I+  Q  + P + L            G  SL +D  +         +G+  
Sbjct: 250 LSQDLAREQIRQAQDGHLPTLNLNASSGVSNNRYSGSKSLAQDADVGQNK-----IGLSF 304

Query: 335 NIPLIENSGRSEQVKAANSAVNQVRYLKAQAKQDLSVLVEKTYLEAEQALEEVTGLNSSL 394
           ++PL +    + QVK A             A + +   V  ++     ++  +     ++
Sbjct: 305 SLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNVNASISSINAYKQAV 364

Query: 395 NLAQENLRLRQKAFSQGLSTSVDVVDAELYLASIRTQQSLASFNYLI----------SLN 444
             AQ +L   +  +S G  T VDV+DA   L + + Q S A +NYLI          +LN
Sbjct: 365 VSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSNARYNYLINELNIKSALGTLN 424

Query: 445 K--LLALSSEMSSFSTYHQSAVALSSLHQSATA 475
           +  L+AL++ +         +VA  +  Q A+A
Sbjct: 425 EQDLVALNNTLGKAIPTSPDSVAPENPQQDASA 457