Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., RND transporter from Cupriavidus basilensis FW507-4G11

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 40/144 (27%), Positives = 65/144 (45%)

Query: 104 LLPLVTHLGAAKSTITERDIFTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQ 163
           LL   T +GA     +    F   +   W +F  GRI A  D A G+E E  +   + + 
Sbjct: 329 LLGSATSVGAGSLFGSGASQFAGVLGLRWRLFDFGRINAQIDQAKGQEAEMLAAYRLAVL 388

Query: 164 ARYEDLAKYYFSVVLAKEVLATRIAVEEGLTQHRDNALKLEQQGQIAHVERLQADASLDK 223
              +D+   + ++V  +E  A      + L + R+ +    Q+G ++ +E LQAD SL +
Sbjct: 389 RATQDVEDAFSALVKREEQTAMLTQGVDSLGRARNASFAAYQKGVVSLIEVLQADESLLR 448

Query: 224 AKVERKKAQKTLDIAQSALTQILG 247
           A   R +AQ     A  A  + LG
Sbjct: 449 ASDARAQAQTESARAAVAAFKALG 472



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 24/201 (11%)

Query: 124 FTSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVL 183
           F + + A W +   G +   ++AA    + +Q+       A     A  Y +V      L
Sbjct: 138 FEADVNASWELDVFGGLRRGREAALADYQASQAGAVATRLAVAAQTADIYIAV----RGL 193

Query: 184 ATRIAVEEGLTQHRDNALK----LEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQ 239
            TR+ V     Q ++  L     L  +G  A ++  QA+ +L + +    + +  LD A 
Sbjct: 194 QTRLKVARHQVQTQEELLSTVNLLYGKGLAAELQVRQAEGALAQVRASIPQLEAGLDAAM 253

Query: 240 SALTQILGA------TETVE----PSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEK 289
           +AL  +LG+      TE  +    P+      +  P       + L   P L + + +  
Sbjct: 254 NALDVMLGSLPGTRRTELAQGADIPAAPQIAISGSP------GELLRRRPDLIVAERRLA 307

Query: 290 QASSLIKAEQGKYYPEVYLYG 310
            +++ I     +YYP+  L G
Sbjct: 308 ASNARIGVAIAEYYPKFSLSG 328