Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., type I secretion outer membrane protein rsaFb from Caulobacter crescentus NA1000

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 36/346 (10%)

Query: 125 TSSIRAIWPIFTGGRITAAQDAAAGKEEEAQSQLAMEIQARYEDLAKYYFSVVLAKEVLA 184
           ++++  I P++TGGR +A   AA      A+  L    Q     + + Y  V   +E L 
Sbjct: 98  SAALSIIQPLYTGGRASAGVSAAEADVLSAREGLRAVEQGVLVSVVQAYVDVRRDQERL- 156

Query: 185 TRIAVEEGLTQHRDNALKLEQQ------GQIAHVERLQADASLDKAKVERKKAQKTLDIA 238
            RIA E      R    +LE+       G+I   +  Q+ A L  AK     AQ  L+++
Sbjct: 157 -RIAKENVAVLQR----QLEESNARFDVGEITRTDVAQSQARLASAKASLSGAQAQLEVS 211

Query: 239 QSALTQILGATE---TVEPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLI 295
           +++   ++G T      EPS    +  S+    AF E      PG++     E+ A++ +
Sbjct: 212 RASYAAVVGQTPGELAPEPSLAGLLPASVD--QAF-EAAQTNNPGVTSAKFNEEAAAARV 268

Query: 296 KAEQGKYYPEVYLYGD--YSLHEDDSLASQMKPDWLV---GVGVNIPLIENSGRSEQVKA 350
              +  Y P V       Y       + SQ           +  +IPL      + QV+A
Sbjct: 269 AVAKAGYRPTVSARASLGYDATRRSGVGSQFDDYSRTVSGAITASIPLFAGGLTTSQVRA 328

Query: 351 ANSAVNQVRYLKAQAKQDLSVLVEKTY---LEAEQALEEVTGLNSSLNLAQENLRLRQKA 407
           AN   +  R     AK+     V   +   L +   L        +  +A E +R  Q+ 
Sbjct: 329 ANERESAARSAVEGAKRTAIQQVSNAWSNLLASRAGLVANEEQVRATRIAFEGVRQEQQV 388

Query: 408 FSQGLSTSVDVV-------DAELYLASIRTQQSLASFNYLISLNKL 446
              GL T++DV+       +AEL L S R  + LAS   L ++ +L
Sbjct: 389 ---GLRTTLDVLNAQLELSNAELALVSARRDEYLASAVVLQAMGQL 431