Pairwise Alignments

Query, 476 a.a., TolC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., conserved hypothetical protein, putative outer membrane efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 18/314 (5%)

Query: 133 PIFTGGRITAAQDAAAGKEEEAQSQ-LAMEIQARYEDLAKYY--FSVVLAKEVLATRIAV 189
           P++ GG+I      A  +++ A+ Q L  + + +   L +Y   FS+    E+L   I  
Sbjct: 114 PLYQGGKIRRTIHKAEMEKQVAELQTLTDQAEIKLGLLNQYMNLFSLFKQHEILMRNI-- 171

Query: 190 EEGLTQHRDNALKLEQQGQIAHVERLQADASLDKAKVERKKAQKTLDIAQSALTQILGAT 249
           EE   + RD   +++++G I + + L+++  L   ++  ++ + ++ +    L  +LG  
Sbjct: 172 EESELRLRD-IRRMKKEGVITNNDVLRSEMQLTNDRLSLQETENSIVLVSQQLDILLGQD 230

Query: 250 ETV---EPSGMLFINTSLPPMHAFIEQTLNTYPGLSLLDAKEKQASSLIKAEQGKYYPEV 306
           E +     + +L    +L     +I       P + LL  + + A + I+  Q    P +
Sbjct: 231 ENLLLKPDTTLLHQAVALEAYDDYITLAYTNDPAMKLLRKQTELARNEIRLAQSLSLPSI 290

Query: 307 YLYGDYSLHEDDS--LASQMKPDWLVGVGVNIPLIENSGRSEQVKAANSAVNQVRYLKAQ 364
            LY   +L    S  L      +W VG+ V+ PL      S ++K +   V+  +  + Q
Sbjct: 291 SLYASNTLARPVSRTLTDMYNNNWNVGLSVSYPLSSIYKNSHKIKESKLMVSLRKNDEEQ 350

Query: 365 AKQDLSVLVEKTYLEAEQALEEVTGLNSSLNLAQENLRLRQKAFSQGLSTSVDVVDA--- 421
             Q + + V   +L  ++AL+ V  L  S+  AQEN R+ Q  +   L+   D++DA   
Sbjct: 351 KMQRIRMDVRTAFLRHQEALQRVEALQLSVRQAQENYRIMQNRYLNQLAILTDLLDANSV 410

Query: 422 ----ELYLASIRTQ 431
               EL L + RT+
Sbjct: 411 RLNVELQLVTARTR 424