Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 40/226 (17%)

Query: 328 EYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHYQVLIEFLRETIKDPLIA 387
           E  ++  + +H+ R  +  +   +++ E + +Q+   ++ +  ++L++   + +KD  I 
Sbjct: 277 ERGQLFSAISHDLRTPITRLRLRVELLEDEQLQRKFSRDLDELELLVKGALQCVKDTDIH 336

Query: 388 GMLLGKTERARELGLELMVE-----DG-----------ARLETLPIHIKAEDVVTILGNL 431
             +      A    LE +VE     DG           A     P+ +K       +GNL
Sbjct: 337 ENIEPVDLNAL---LECLVEPWLLADGNGRVTQQGEAQAAYSGKPLALKR-----CIGNL 388

Query: 432 IDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGLPKE-LEHWQLTEK 490
           IDNA +    A               + + D     +L VDD+G G+P++ LEH      
Sbjct: 389 IDNALKYGDRA--------------HLKVEDDARAFVLHVDDEGPGVPEQRLEHVFEPHF 434

Query: 491 GVSSKAVQNRGVGLFLVKQLADRYQGQLDMHS-KAQGTRMTVYLPK 535
            ++    Q  G+GL + + +A  + G++ + + +  G R+T+YLP+
Sbjct: 435 RLAGNQQQGYGLGLGIARNIAHSHGGEVSLQNLRDGGLRVTLYLPR 480