Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., sensor histidine kinase from Rahnella sp. WP5

 Score =  248 bits (632), Expect = 6e-70
 Identities = 175/549 (31%), Positives = 291/549 (53%), Gaps = 35/549 (6%)

Query: 6   ITFRKRMLIIMTLSGLIELLLLVAAGFMYVKHSQEQEVGQKALGVAAFLAQTPAVINMIK 65
           + F+ ++ + + +   + L LL A  F  +      ++GQ+A   A+ +A  P +   ++
Sbjct: 5   LPFQVKLFLSLVVFSCVLLALLGAILFHIIDRQLHHDLGQRARVQASEIALMPGLAQKVQ 64

Query: 66  TGRASDDQQQSYRELTQLIGAAFIVIGDNQGIRLVHPID-ERIGKPMVGGDNERALVEGE 124
             R      +  + L     A++IVIGD + + L H    ERI  PM+GGDN   L  G+
Sbjct: 65  A-RDIPGIAKLIQPLRDKSDASYIVIGDTRELHLYHSESPERIDLPMIGGDNAGVLA-GK 122

Query: 125 AYVSFAQGSLGKSVRGKAAVVDQHGQIIGVVSVGYL---IERLQDR--VEPFLFYLIATA 179
             +S  QG +G S+R KA ++D   Q+IG+VSVGYL   I+ +  R   +  L+ L+   
Sbjct: 123 TIISVRQGGIGVSLRSKAPILDASNQVIGIVSVGYLTSYIDNINGRRLAQAGLYGLLLLL 182

Query: 180 LLVVGANALVSSYASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSI 239
           LL +      S   +R  ++ +   EP++IA L  +    +  + EG+ +I+ +  L SI
Sbjct: 183 LLFI-----FSWMFTRNVKKQMFWLEPKDIALLVRQQKALLEAMYEGVFAINAERQLISI 237

Query: 240 NKSACEILGLRR--EQALNRRLTTIL---PESDLYTVLATGRTDHDIELYLNKHWIIANR 294
           N++A E+L +R+   + L + L  +L   P   +   ++   + HD    LN+  +I NR
Sbjct: 238 NRAARELLDIRQPENELLGKPLAEVLQTPPTFFMQRGVSENNSQHDQITVLNQRQVIVNR 297

Query: 295 SPIVVE-GKVVGAVSSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQM 353
            PI +E G   G V SFR +++IN L+ QL+Q + YA+ LR   HE  N   T++GLLQM
Sbjct: 298 VPIELEPGAESGWVFSFRDKNDINTLSSQLSQVKRYADNLRIMRHEQLNWTATLAGLLQM 357

Query: 354 GELDAVQQLIGQETEHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLE 413
              D   + I  ++E  Q +++F+      P + G+LLGK   ARE G+EL  +   +L 
Sbjct: 358 QRYDDAMRYIQAQSEGAQAVLDFVSARFTSPALCGLLLGKYVSAREKGVELSFDPACQLT 417

Query: 414 TLPIHIKAEDVVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDD 473
            +P  I   ++++++GNL+DNA +ATL A+   +PV       E+ ISD   E+++EV D
Sbjct: 418 RIPAAISETELMSVIGNLLDNAVDATLKALTPPAPV-------ELYISDRNRELLIEVAD 470

Query: 474 QGCGLPKELEHWQLTEKGVSSKAVQNR-------GVGLFLVKQLADRYQGQLDMHSKA-Q 525
           QG G+   L+   L E+GV+SK    +       G+GL+LV     +  G +++     Q
Sbjct: 471 QGSGVEDALKP-HLFEQGVTSKPSSGQDATGAEHGIGLYLVAGYVRQAGGSIEISDNTPQ 529

Query: 526 GTRMTVYLP 534
           GT  +V++P
Sbjct: 530 GTIFSVFIP 538