Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., two-component system sensor histidine kinase DcuS from Rahnella sp. WP5

 Score =  202 bits (513), Expect = 3e-56
 Identities = 160/534 (29%), Positives = 266/534 (49%), Gaps = 32/534 (5%)

Query: 14  IIMTLSGLIELLLLVA--AGFMYVKHSQEQEVGQKALGVAAFLAQTPAVINMIKTGRASD 71
           + + +S +I  +LLV     F+ V  +    V +KAL VA  +A  P     +     S+
Sbjct: 21  VSLMISAVIASVLLVVHMLYFVQVSDTTRDGVKEKALAVARTMADLPETKRALLLPPDSN 80

Query: 72  DQQQSYRELTQLIGAAFIVIGDNQGIRLVHPIDERIGKPMVGGDNERALVEGEAYVSFAQ 131
             Q     + +     FIV+ +  GIR  HP  + I    +G D   AL+ G   VS  +
Sbjct: 81  IIQPIASAVQKRNDLLFIVVTNMDGIRYSHPNADVISHHFIGDDINPALL-GNENVSINK 139

Query: 132 GSLGKSVRGKAAVVDQHGQIIGVVSVGYLIERLQDRVEPFLFYLIATALLVVGANALVSS 191
           G+L K++R    V D H + IGVV++G  + ++ +++    + ++ T L  +   AL + 
Sbjct: 140 GTLDKALRVFTPVYDDHHKQIGVVAIGISLVKVTEQINKSRWSILWTVLFGLMVGALGTY 199

Query: 192 YASRRFQRAILGFEPEEIARLYVELDVTMSTLKEGIISIDDKGILRSINKSACEILGLRR 251
              +  +R + G EP EI+ L+ +    + ++KEG+I++DD+  +  IN++A +     R
Sbjct: 200 CLVKLLKRILFGLEPYEISTLFEQRQAMLQSIKEGVIAVDDQAHVTLINQTARQTF---R 256

Query: 252 EQALNRRLTTILPESD-------LYTVLATGRTDHDIELYLNKHWIIANRSPIVVEGKVV 304
           E A++     + P++D       L  VL TG    D E+      +++N  P+   G ++
Sbjct: 257 ETAID-----VTPDADSLPLIANLRDVLNTGVPRRDEEINFKGRLLLSNTVPVRNNGVII 311

Query: 305 GAVSSFRLRDEINELTEQLAQTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIG 364
           GA+ +FR + E+++L ++L+    YA+ LR ++HE  NKL+ I GLL M     ++  I 
Sbjct: 312 GAICTFRDKTEVSQLMQRLSGMVNYADSLRERSHEFMNKLHVILGLLHMKSYAQLEDYIL 371

Query: 365 QETEHYQVLIEFLRETIKDPLIAGMLLGKTERARELGLELMVEDGARLETLPIHIKAEDV 424
           +   +YQ  I  L   IK P+IAG LL K  RA +    L + D + L       +   +
Sbjct: 372 KTANNYQAEIGSLLLKIKSPVIAGFLLSKMNRASDTRHLLTLSDDSLLPDNNNEDQVAAL 431

Query: 425 VTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILEVDDQGCGL-PKELE 483
           +T+LGNLI+NA +A       L   P     + V +      +   V D G G+ P+ ++
Sbjct: 432 ITVLGNLIENALDA-------LGDQPDGE--VSVLLHYQNGSLACIVSDDGPGIQPENID 482

Query: 484 HWQLTEKGVSSKAVQNRGVGLFLVKQLADRYQGQLDMHSKAQ-GTRMTVYLPKD 536
              + EKGVSSK  Q RG+GLFL KQ  +   G + + S+    T+  V LP D
Sbjct: 483 --AIFEKGVSSKGDQ-RGMGLFLAKQQVESLGGTITVESEPDVYTQFFVQLPWD 533