Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., PAS domain-containing sensor histidine kinase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 50.8 bits (120), Expect = 9e-11
 Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 30/182 (16%)

Query: 216 LDVTMSTLKEGIISIDDKGILRSINKSACEILGLRREQALNRRLTTILPESDLYTVLATG 275
           LD  +    +GII+IDDKGI+  +N +A E+ G  + + + + ++ ++PE D        
Sbjct: 7   LDAIIENAIDGIITIDDKGIIEHLNPAALELFGYDKAELVGKNVSVLMPEPD------HS 60

Query: 276 RTDHDIELYLN---KHWIIANRSPIVVEGK-VVGAVSSFRL-------------RDEINE 318
           R D  +  Y +   KH I   R    V GK   G+V  FRL                I++
Sbjct: 61  RHDGYLSRYEHTGQKHIIGVGRE---VSGKRKDGSVFPFRLGVSEIEFSDRKIYTGFIHD 117

Query: 319 LTEQLA---QTREYAEMLRSQTHEHRNKLNTISGLLQMGELDAVQQLIGQETEHYQVLIE 375
           L+++ A   Q R Y E L  +  E  + L  +   L+M + + +Q L  +E E  Q+   
Sbjct: 118 LSKEKANEEQIRSYTEKLEVKIKERTHDLVKLVSELEMAK-ENMQALFQKEKELNQLKTR 176

Query: 376 FL 377
           F+
Sbjct: 177 FV 178



 Score = 28.1 bits (61), Expect = 6e-04
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 465 NEIILEVDDQGCGLPKELEHWQLTE---KGVSSKAVQNRGVGLFLVKQLADRYQGQLDMH 521
           +E++LEV D G G+PK ++   L E   +  ++  +   G+GL +VK+      G +   
Sbjct: 321 DELLLEVKDNGIGIPK-VDQNNLFEPFFRAHNTGDIPGTGLGLNIVKRYVGLMNGTVACQ 379

Query: 522 SKA-QGTRMTV 531
           S+   GT  T+
Sbjct: 380 SEQNSGTVFTL 390