Pairwise Alignments

Query, 538 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 26/191 (13%)

Query: 355 ELDAVQQLIGQETEHYQVLIEFL----RETIKDPLIAGMLLGKTERARELGLELMVEDGA 410
           +LD + ++I ++    ++  + L     +  KD       L K    + +  E  +++  
Sbjct: 274 QLDQIHKMIERKLAAARITGDMLPAAQMQLPKDLQDLAQTLTKVHGHKAIACEFSLDE-- 331

Query: 411 RLETLPIHIKAEDVVTILGNLIDNAFEATLTAIRTLSPVPPERRVIEVSISDFGNEIILE 470
           RL  LPIH   ED + ++GNL+DNAF+   +              + VS +    +I+L 
Sbjct: 332 RLSRLPIH--REDGMELIGNLLDNAFKWADSK-------------VAVSTAQTDEQILLT 376

Query: 471 VDDQGCGLPKELEHWQLTEKGVS-SKAVQNRGVGLFLVKQLADRYQGQLDMHSKAQ--GT 527
           ++D G G+  E     LT++G    +A+   G+GL +VK +A++Y+  L      Q  G 
Sbjct: 377 IEDDGPGVADEALS-LLTQRGKRLDEAIMGHGLGLSIVKDIAEQYEISLAFEHSQQLGGL 435

Query: 528 RMTVYLPKDEL 538
           ++T+ L KD L
Sbjct: 436 KITLGL-KDRL 445